SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800705
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr3:46977048-46989566
Size: 12518
Super-enhancer rank 705
Number of SE elements: 6
ChIP density(Case|Control): 13715.9726|991.4256
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCDC12 ;
ROSE Overlap NBEAL2 ; CCDC12 ;
ROSE Proximal NRADDP ; CCDC12 ;
ROSE Closest CCDC12 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NBEAL2 ; CCDC12 ; NRADDP ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800705 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers