SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_098800656
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr19:43609809-43636460
Size: 26651
Super-enhancer rank 656
Number of SE elements: 5
ChIP density(Case|Control): 15257.6975|2004.1552
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF428 ;
ROSE Overlap CADM4 ; ZNF428 ; SRRM5 ;
ROSE Proximal PINLYP ; ZNF576 ; XRCC1 ; IRGQ ; PLAUR ;
ROSE Closest ZNF428 ;
Lasso PLAUR ; KCNN4 ; CADM4 ; SMG9 ; ZNF576 ; IRGQ ; SRRM5 ;
PreSTIGE ;
ABC ;
BETA PLAUR ; ZNF576 ; ETHE1 ; XRCC1 ; IRGC ; ZNF575 ; IRGQ ; SRRM5 ; ZNF428 ; PINLYP ; CADM4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800656 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers