SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800653
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr19:3604654-3613616
Size: 8962
Super-enhancer rank 653
Number of SE elements: 4
ChIP density(Case|Control): 14136.6588|853.1824
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CACTIN-AS1 ;
ROSE Overlap CACTIN-AS1 ; TBXA2R ; CACTIN ;
ROSE Proximal HMG20B ; MFSD12 ; GIPC3 ;
ROSE Closest CACTIN-AS1 ;
Lasso ;
PreSTIGE ;
ABC CACTIN ; CACTIN-AS1 ; MFSD12 ; HMG20B ; GIPC3 ; TBXA2R ;
BETA FZR1 ; TBXA2R ; CACTIN ; GIPC3 ; TJP3 ; HMG20B ; PIP5K1C ; MFSD12 ; C19orf71 ; CACTIN-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800653 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers