SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800645
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr12:6610883-6640954
Size: 30071
Super-enhancer rank 645
Number of SE elements: 10
ChIP density(Case|Control): 14704.719|1308.0885
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LPAR5 ;
ROSE Overlap ACRBP ; LPAR5 ;
ROSE Proximal CHD4 ; ZNF384 ; ING4 ; SCARNA11 ; NOP2 ;
ROSE Closest LPAR5 ;
Lasso NCAPD2 ; MLF2 ; GAPDH ; NOP2 ; CHD4 ; ACRBP ; COPS7A ; ING4 ; ZNF384 ; LPAR5 ;
PreSTIGE ;
ABC ;
BETA IFFO1 ; LPAR5 ; COPS7A ; GAPDH ; NOP2 ; ZNF384 ; SCARNA11 ; CHD4 ; ACRBP ; ING4 ; PIANP ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800645 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers