SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800609
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr1:30869985-30899643
Size: 29658
Super-enhancer rank 609
Number of SE elements: 13
ChIP density(Case|Control): 16172.5074|2509.0668
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SDC3 ;
ROSE Overlap SDC3 ;
ROSE Proximal SNORD103A ;
ROSE Closest SDC3 ;
Lasso SDC3 ;
PreSTIGE ;
ABC ;
BETA SNORD103B ; SNORD103A ; SDC3 ; SNORD85 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800609 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers