SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800561
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr1:228366868-228373185
Size: 6317
Super-enhancer rank 561
Number of SE elements: 3
ChIP density(Case|Control): 15392.0022|1145.9038
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR6742 ;
ROSE Overlap OBSCN ;
ROSE Proximal TRIM11 ; MIR6742 ; TRIM17 ;
ROSE Closest MIR6742 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HIST3H3 ; HIST3H2A ; TRIM17 ; MIR6742 ; MIR4666A ; HIST3H2BB ; TRIM11 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800561 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers