SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_098800532
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr19:43763563-43785451
Size: 21888
Super-enhancer rank 532
Number of SE elements: 10
ChIP density(Case|Control): 16258.4064|1650.3552
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KCNN4 ;
ROSE Overlap KCNN4 ;
ROSE Proximal LYPD5 ; ZNF283 ; SMG9 ; IRGC ;
ROSE Closest KCNN4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SMG9 ; ZNF283 ; IRGC ; KCNN4 ; LYPD5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800532 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers