SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800531
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr19:18402693-18429917
Size: 27224
Super-enhancer rank 531
Number of SE elements: 8
ChIP density(Case|Control): 16495.0216|1848.5096
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SSBP4 ;
ROSE Overlap SSBP4 ;
ROSE Proximal GDF15 ; MIR3189 ; ISYNA1 ; LRRC25 ;
ROSE Closest SSBP4 ;
Lasso ISYNA1 ; SSBP4 ; GDF15 ; PGPEP1 ; KIAA1683 ; LSM4 ; JUND ; PDE4C ; LRRC25 ;
PreSTIGE ;
ABC KIAA1683 ; LOC729966 ; JUND ; LSM4 ; PGPEP1 ;
BETA LSM4 ; LRRC25 ; MIR3189 ; GDF15 ; ISYNA1 ; PGPEP1 ; SSBP4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800531 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers