SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800488
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr19:6513071-6536887
Size: 23816
Super-enhancer rank 488
Number of SE elements: 9
ChIP density(Case|Control): 17369.0088|2038.6496
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNFSF9 ;
ROSE Overlap TNFSF9 ;
ROSE Proximal CRB3 ; DENND1C ; TUBB4A ;
ROSE Closest TNFSF9 ;
Lasso ;
PreSTIGE ;
ABC DENND1C ; TUBB4A ; TNFSF9 ;
BETA TUBB4A ; TNFSF9 ; SLC25A41 ; DENND1C ; CRB3 ; SLC25A23 ; CD70 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800488 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers