SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800385
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr1:21769439-21792503
Size: 23064
Super-enhancer rank 385
Number of SE elements: 8
ChIP density(Case|Control): 21384.9408|4082.328
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: USP48 ;
ROSE Overlap USP48 ;
ROSE Proximal LDLRAD2 ;
ROSE Closest USP48 ;
Lasso RAP1GAP ; HSPG2 ;
PreSTIGE ;
ABC NBPF3 ;
BETA USP48 ; LDLRAD2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800385 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers