SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800345
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr21:8230458-8237514
Size: 7056
Super-enhancer rank 345
Number of SE elements: 3
ChIP density(Case|Control): 36605.1168|18405.576
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNA28S5 ;
ROSE Overlap RNA28S5 ;
ROSE Proximal MIR6724-1 ; MIR3687-1 ; MIR3648-1 ; RNA5-8S5 ; RNA18S5 ;
ROSE Closest RNA28S5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR6724-1 ; RNA28S5 ; MIR6724-2 ; MIR3648-1 ; RNA5-8S5 ; LOC100507412 ; MIR6724-3 ; MIR6724-4 ; MIR3648-2 ; MIR663A ; MIR3687-1 ; RNA18S5 ; MIR3687-2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800345 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers