SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800300
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chrX:49145283-49168635
Size: 23352
Super-enhancer rank 300
Number of SE elements: 10
ChIP density(Case|Control): 21119.5488|1424.472
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAGIX ;
ROSE Overlap MAGIX ;
ROSE Proximal PRICKLE3 ; WDR45 ; SYP-AS1 ; GPKOW ; PLP2 ; SYP ;
ROSE Closest MAGIX ;
Lasso PRICKLE3 ; MAGIX ; PPP1R3F ; GPKOW ; HDAC6 ; CCDC22 ; CACNA1F ; SYP ; PLP2 ; CCDC120 ; WDR45 ; AF196779.12 ;
PreSTIGE ;
ABC ;
BETA MAGIX ; CACNA1F ; PRAF2 ; CCDC120 ; CCDC22 ; WDR45 ; PLP2 ; PRICKLE3 ; GPKOW ; SYP ; SYP-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800300 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers