SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800255
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr1:1103704-1159014
Size: 55310
Super-enhancer rank 255
Number of SE elements: 10
ChIP density(Case|Control): 25520.034|4175.905
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC01342 ;
ROSE Overlap C1orf159 ; LINC01342 ;
ROSE Proximal TTLL10 ; RNF223 ; TNFRSF18 ; MIR200A ; MIR429 ; MIR200B ;
ROSE Closest LINC01342 ;
Lasso SDF4 ; C1orf159 ; AGRN ; RNF223 ;
PreSTIGE ;
ABC TNFRSF4 ;
BETA RNF223 ; MIR200A ; MIR429 ; MIR200B ; LINC01342 ; C1orf159 ; TTLL10 ; TNFRSF4 ; TNFRSF18 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800255 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers