SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800234
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr4:2374874-2417361
Size: 42487
Super-enhancer rank 234
Number of SE elements: 21
ChIP density(Case|Control): 25415.7234|3386.2139
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZFYVE28 ;
ROSE Overlap ZFYVE28 ;
ROSE Proximal CFAP99 ; ZFYVE28 ;
ROSE Closest ZFYVE28 ;
Lasso POLN ; ZFYVE28 ; HAUS3 ; RP11-503N18.3 ;
PreSTIGE ;
ABC CFAP99 ; ZFYVE28 ; RNF4 ; NAT8L ; POLN ; MXD4 ; HAUS3 ;
BETA ZFYVE28 ; RNF4 ; CFAP99 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800234 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers