SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800201
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr6:41935601-41968113
Size: 32512
Super-enhancer rank 201
Number of SE elements: 12
ChIP density(Case|Control): 29894.784|6434.1248
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCND3 ;
ROSE Overlap CCND3 ;
ROSE Proximal USP49 ; BYSL ; MED20 ;
ROSE Closest CCND3 ;
Lasso CCND3 ; BYSL ; MED20 ; FRS3 ; TAF8 ; USP49 ;
PreSTIGE ;
ABC ;
BETA CCND3 ; MED20 ; USP49 ; TAF8 ; BYSL ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800201 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers