SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800083
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr16:103540-164644
Size: 61104
Super-enhancer rank 83
Number of SE elements: 16
ChIP density(Case|Control): 38049.4608|5261.0544
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NPRL3 ;
ROSE Overlap NPRL3 ; HBZ ;
ROSE Proximal POLR3K ; SNRNP25 ; HBM ; RHBDF1 ; MPG ; NPRL3 ; HBQ1 ; HBA2 ; HBA1 ;
ROSE Closest NPRL3 ;
Lasso RHBDF1 ; LUC7L ; HBQ1 ; NPRL3 ; MPG ; HBZ ; POLR3K ; SNRNP25 ; ITFG3 ; HBA2 ; HBA1 ; HBM ;
PreSTIGE ;
ABC POLR3K ; SNRNP25 ; MPG ; RHBDF1 ; HBQ1 ; NPRL3 ; HBA1 ; HBZ ; HBM ; LUC7L ; LMF1-AS1 ; CHTF18 ; PIGQ ; NHLRC4 ; CAPN15 ; LINC00235 ; RPUSD1 ; NARFL ; LMF1 ; RAB11FIP3 ; WDR24 ; FAM234A ; AXIN1 ; MRPL28 ; WFIKKN1 ; TMEM8A ; LOC100134368 ; CACNA1H ; NME4 ; RAB40C ; DECR2 ;
BETA NPRL3 ; HBZ ; HBM ; LUC7L ; SNRNP25 ; POLR3K ; HBA2 ; MPG ; HBA1 ; HBQ1 ; RHBDF1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800083 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers