SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800056
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr3:50572343-50614138
Size: 41795
Super-enhancer rank 56
Number of SE elements: 22
ChIP density(Case|Control): 40729.2275|2921.4705
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CISH ;
ROSE Overlap HEMK1 ; CISH ; MAPKAPK3 ;
ROSE Proximal C3orf18 ; CISH ; MAPKAPK3 ;
ROSE Closest CISH ;
Lasso ;
PreSTIGE ;
ABC C3orf18 ; HEMK1 ; MAPKAPK3 ; CACNA2D2 ; CYB561D2 ; NPRL2 ; TMEM115 ;
BETA C3orf18 ; MAPKAPK3 ; DOCK3 ; CISH ; CACNA2D2 ; MIR4787 ; HEMK1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800056 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers