SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800054
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr17:78228985-78281884
Size: 52899
Super-enhancer rank 54
Number of SE elements: 19
ChIP density(Case|Control): 41578.614|3464.8845
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100996291 ;
ROSE Overlap TMEM235 ; LOC100996291 ;
ROSE Proximal AFMID ; TK1 ; TMEM235 ; BIRC5 ;
ROSE Closest LOC100996291 ;
Lasso ;
PreSTIGE ;
ABC RNF213 ; SLC26A11 ; SGSH ;
BETA TMEM235 ; AFMID ; BIRC5 ; TK1 ; LOC100996291 ; SYNGR2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800054 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers