SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800020
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr1:16642892-16687316
Size: 44424
Super-enhancer rank 20
Number of SE elements: 7
ChIP density(Case|Control): 57880.0296|12181.0608
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAM231C ;
ROSE Overlap MST1P2 ; FAM231A ; FAM231C ; RNVU1-18 ; MIR3675 ;
ROSE Proximal NBPF1 ; CROCCP2 ; ESPNP ;
ROSE Closest FAM231C ;
Lasso SZRD1 ; AL137798.1 ;
PreSTIGE ;
ABC FBXO42 ; SZRD1 ;
BETA RNU1-4 ; RNU1-1 ; RNU1-27P ; RNVU1-18 ; FAM231A ; MIR3675 ; RNU1-28P ; MST1L ; RNU1-2 ; MST1P2 ; RNU1-3 ; NBPF1 ; CROCCP2 ; ESPNP ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800020 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers