SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_098800010
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: K562_EPZ
Genomic region: chr3:45041022-45108432
Size: 67410
Super-enhancer rank 10
Number of SE elements: 34
ChIP density(Case|Control): 65158.506|9423.918
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLEC3B ;
ROSE Overlap CDCP1 ;
ROSE Proximal CLEC3B ; CDCP1 ;
ROSE Closest CLEC3B ;
Lasso EXOSC7 ; ZDHHC3 ; CDCP1 ; TMEM158 ;
PreSTIGE ;
ABC CLEC3B ; LIMD1 ; SACM1L ; LARS2-AS1 ; LARS2 ; TMEM158 ; LIMD1-AS1 ; ZNF35 ; CDCP1 ; EXOSC7 ; ZDHHC3 ;
BETA ZDHHC3 ; EXOSC7 ; CLEC3B ; CDCP1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098800010 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers