SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_098200315
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M-KO_BT245-C2P3
Genomic region: chr17:47978806-48024484
Size: 45678
Super-enhancer rank 315
Number of SE elements: 6
ChIP density(Case|Control): 23400.8394|5901.5976
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDK5RAP3;
ROSE Overlap CDK5RAP3;
ROSE Proximal PNPO; NFE2L1; PRR15L; CDK5RAP3; SP2-AS1; COPZ2; MIR152;
ROSE Closest CDK5RAP3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098200315 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers