SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_098200225
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M-KO_BT245-C2P3
Genomic region: chr12:6924412-6939044
Size: 14632
Super-enhancer rank 225
Number of SE elements: 2
ChIP density(Case|Control): 22057.74|1849.4848
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATN1;
ROSE Overlap ATN1;
ROSE Proximal PTPN6; MIR141; ENO2; MIR200C; SCARNA12; PHB2; RNU7-1; C12orf57; LRRC23; DSTNP2; EMG1; RPL13P5;
ROSE Closest ATN1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_098200225 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers