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Super-enhancer overview

SE ID: SE_02_097400379
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M-KO_DIPGXIII-C14-nKO-Rx_PARENTAL_cells
Genomic region: chr2:200862195-200865255
Size: 3060
Super-enhancer rank 379
Number of SE elements: 1
ChIP density(Case|Control): 7541.982|533.052
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLK1;
ROSE Overlap CLK1;
ROSE Proximal CLK1; RNU6-31P; PPIL3; NIF3L1; BZW1;
ROSE Closest CLK1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_097400379 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers