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Super-enhancer overview

SE ID: SE_02_097400089
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M-KO_DIPGXIII-C14-nKO-Rx_PARENTAL_cells
Genomic region: chr12:52018914-52040839
Size: 21925
Super-enhancer rank 89
Number of SE elements: 6
ChIP density(Case|Control): 15233.49|2644.155
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NR4A1;
ROSE Overlap NR4A1;
ROSE Proximal GRASP; ATG101; NR4A1; OR7E47P;
ROSE Closest NR4A1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_097400089 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers