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Super-enhancer overview

SE ID: SE_02_097400012
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M-KO_DIPGXIII-C14-nKO-Rx_PARENTAL_cells
Genomic region: chr5:139636088-139748554
Size: 112466
Super-enhancer rank 12
Number of SE elements: 26
ChIP density(Case|Control): 39779.2242|11111.6408
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CXXC5;
ROSE Overlap LOC101929696; CXXC5;
ROSE Proximal PSD2;
ROSE Closest CXXC5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_097400012 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers