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Super-enhancer overview

SE ID: SE_02_097200846
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M-KO_BT245-D2p8-Rx_R1_cells
Genomic region: chr1:32334202-32352869
Size: 18667
Super-enhancer rank 846
Number of SE elements: 3
ChIP density(Case|Control): 18215.2586|1799.4988
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MARCKSL1;
ROSE Overlap MARCKSL1;
ROSE Proximal TSSK3; BSDC1; HDAC1; FAM229A;
ROSE Closest MARCKSL1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_097200846 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers