SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_097200723
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M-KO_BT245-D2p8-Rx_R1_cells
Genomic region: chr12:56115244-56120800
Size: 5556
Super-enhancer rank 723
Number of SE elements: 1
ChIP density(Case|Control): 18474.2556|662.2752
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZC3H10;
ROSE Overlap ZC3H10; RPL41;
ROSE Proximal ERBB3; MYL6B; MYL6; ESYT1; PA2G4;
ROSE Closest ZC3H10;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_097200723 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers