SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_097200541
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M-KO_BT245-D2p8-Rx_R1_cells
Genomic region: chr14:21068551-21074883
Size: 6332
Super-enhancer rank 541
Number of SE elements: 1
ChIP density(Case|Control): 20868.3724|761.1064
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NDRG2;
ROSE Overlap ARHGEF40; NDRG2;
ROSE Proximal NDRG2; ZNF219; RNASE7; ARHGEF40; TPPP2; MIR6717; RNASE8; RNASE13; TMEM253;
ROSE Closest NDRG2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_097200541 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers