SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_097100315
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M_XPS124018_xenograft
Genomic region: chr20:63289924-63320830
Size: 30906
Super-enhancer rank 315
Number of SE elements: 7
ChIP density(Case|Control): 25923.9528|3266.7642
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: COL20A1;
ROSE Overlap COL20A1;
ROSE Proximal ARFGAP1; LOC100130587; CHRNA4; MIR4326; FLJ16779; NKAIN4;
ROSE Closest COL20A1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_097100315 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers