SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_096700466
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M_JN57
Genomic region: chr9:3500008-3529441
Size: 29433
Super-enhancer rank 466
Number of SE elements: 8
ChIP density(Case|Control): 10928.4729|2154.4956
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RFX3;
ROSE Overlap RFX3;
ROSE Proximal RFX3;
ROSE Closest RFX3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_096700466 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers