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Super-enhancer overview

SE ID: SE_02_096700138
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M_JN57
Genomic region: chr5:141477603-141529914
Size: 52311
Super-enhancer rank 138
Number of SE elements: 20
ChIP density(Case|Control): 17613.1137|2934.6471
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PCDHGC5;
ROSE Overlap PCDHGB5; PCDHGB1; PCDHGC4; PCDHGA1; PCDHGA6; PCDHGB2; PCDHGA2; PCDHGA4; PCDHGB3; PCDHGC3; PCDHGA3; PCDHGA11; PCDHGA8; PCDHGA10; PCDHGA12; PCDHGA9; PCDHGB6; PCDHGA7; PCDHGC5; PCDHGA5; PCDHGB7; DIAPH1; PCDHGB4;
ROSE Proximal PCDHGA12; LOC100505658;
ROSE Closest PCDHGC5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_096700138 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers