SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_096600789
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M_JN29-BS3
Genomic region: chr1:151056193-151065687
Size: 9494
Super-enhancer rank 789
Number of SE elements: 4
ChIP density(Case|Control): 7646.4676|1021.5544
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MLLT11;
ROSE Overlap MLLT11; CDC42SE1;
ROSE Proximal CDC42SE1; PRUNE; C1orf56; BNIPL; GABPB2; FAM63A;
ROSE Closest MLLT11;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_096600789 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers