SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_096600596
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M_JN29-BS3
Genomic region: chr1:27858319-27892830
Size: 34511
Super-enhancer rank 596
Number of SE elements: 12
ChIP density(Case|Control): 9787.3196|1898.105
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: THEMIS2;
ROSE Overlap RPA2; THEMIS2;
ROSE Proximal SCARNA1; PPP1R8; SMPDL3B; THEMIS2;
ROSE Closest THEMIS2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_096600596 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers