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Super-enhancer overview

SE ID: SE_02_096600041
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M_JN29-BS3
Genomic region: chr4:1746807-1810527
Size: 63720
Super-enhancer rank 41
Number of SE elements: 29
ChIP density(Case|Control): 30305.232|4033.476
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FGFR3;
ROSE Overlap FGFR3;
ROSE Proximal SLBP; TACC3; FGFR3; TMEM129; LETM1;
ROSE Closest FGFR3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_096600041 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers