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Super-enhancer overview

SE ID: SE_02_096400013
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M_HSJ019-Tumor-Rx_brain
Genomic region: chr19:12777287-12794743
Size: 17456
Super-enhancer rank 13
Number of SE elements: 5
ChIP density(Case|Control): 27048.072|2585.2336
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR5684;
ROSE Overlap JUNB; MIR5684;
ROSE Proximal BEST2; RTBDN; ASNA1; HOOK2; RNASEH2A; PRDX2; C19orf43; MAST1;
ROSE Closest MIR5684;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_096400013 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers