SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_096100468
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M_Tumor-derived cell-line_DIPGVI_c27_cells
Genomic region: chr12:52053650-52064602
Size: 10952
Super-enhancer rank 468
Number of SE elements: 3
ChIP density(Case|Control): 4569.1744|872.8744
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NR4A1;
ROSE Overlap NR4A1;
ROSE Proximal GRASP; OR7E47P; ATG101;
ROSE Closest NR4A1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_096100468 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers