SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_096000298
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells
Genomic region: chr12:24551016-24564015
Size: 12999
Super-enhancer rank 298
Number of SE elements: 3
ChIP density(Case|Control): 6654.1881|1477.9863
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SOX5;
ROSE Overlap SOX5;
ROSE Proximal LINC00477;
ROSE Closest SOX5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_096000298 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers