SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_094900277
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Umbilical artery
Biosample name: HUAEC_WT
Genomic region: chr7:27165671-27180185
Size: 14514
Super-enhancer rank 277
Number of SE elements: 1
ChIP density(Case|Control): 25367.5692|865.0344
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXA10;
ROSE Overlap MIR196B; HOXA10; HOXA10-HOXA9; HOXA10-AS;
ROSE Proximal HOXA11; HOXA-AS3; HOTTIP; HOXA-AS2; HOXA7; HOXA3; HOXA5; HOXA4; HOXA9; HOXA13; HOXA6; HOXA11-AS;
ROSE Closest HOXA10;
Lasso HOXA4; HOXA11; HOXA2; HOXA5; HOXA6;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_094900277 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers