SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_094100643
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: T98G
Genomic region: chr17:28716981-28721423
Size: 4442
Super-enhancer rank 643
Number of SE elements: 1
ChIP density(Case|Control): 7799.2636|489.0642
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPL23A ;
ROSE Overlap RPL23A ; RAB34 ; NARR ; SNORD42B ;
ROSE Proximal SNORD4B ; TLCD1 ; PROCA1 ; SNORD42A ; SNORD4A ; TRAF4 ; RAB34 ; NEK8 ;
ROSE Closest RPL23A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PROCA1 ; TRAF4 ; SNORD42A ; KIAA0100 ; NEK8 ; RAB34 ; SNORD4B ; SNORD4A ; FAM222B ; SDF2 ; RPL23A ; SNORD42B ; TLCD1 ; NARR ; SUPT6H ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_094100643 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers