SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_094100628
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: T98G
Genomic region: chr17:50209347-50222892
Size: 13545
Super-enhancer rank 628
Number of SE elements: 5
ChIP density(Case|Control): 9045.351|1615.9185
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC101927230 ;
ROSE Overlap LOC101927230 ;
ROSE Proximal SGCA ; HILS1 ; TMEM92 ; COL1A1 ;
ROSE Closest LOC101927230 ;
Lasso SGCA ; COL1A1 ; MRPL27 ; XYLT2 ; TMEM92 ;
PreSTIGE ;
ABC ;
BETA HILS1 ; TMEM92-AS1 ; PPP1R9B ; SGCA ; TMEM92 ; COL1A1 ; SAMD14 ; LOC101927230 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_094100628 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers