SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_094100617
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: T98G
Genomic region: chr12:53964004-53978895
Size: 14891
Super-enhancer rank 617
Number of SE elements: 3
ChIP density(Case|Control): 8751.4407|1215.1056
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXC11;
ROSE Overlap HOXC11; HOTAIR;
ROSE Proximal HOXC12; HOXC4; HOXC-AS2; HOXC13; HOXC9; HOXC6; HOXC8; HOXC-AS1; MIR196A2; HOXC13-AS; HOXC10; HOXC-AS3;
ROSE Closest HOXC11;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_094100617 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers