SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_094100515
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: T98G
Genomic region: chr12:2243933-2265324
Size: 21391
Super-enhancer rank 515
Number of SE elements: 7
ChIP density(Case|Control): 11127.5982|2748.7435
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CACNA1C-IT3 ;
ROSE Overlap CACNA1C ;
ROSE Proximal CACNA1C-AS4 ; CACNA1C-IT3 ;
ROSE Closest CACNA1C-IT3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CACNA1C-IT3 ; CACNA1C-AS4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_094100515 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers