SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_094100098
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: T98G
Genomic region: chr11:65416612-65427401
Size: 10789
Super-enhancer rank 98
Number of SE elements: 3
ChIP density(Case|Control): 20510.9679|1721.9244
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NEAT1 ;
ROSE Overlap NEAT1 ;
ROSE Proximal SLC25A45 ; FRMD8 ; MIR612 ;
ROSE Closest NEAT1 ;
Lasso SLC25A45 ; EHBP1L1 ; LTBP3 ; DPF2 ; CDC42EP2 ; SCYL1 ; FRMD8 ; FAM89B ;
PreSTIGE ;
ABC ;
BETA SLC25A45 ; FRMD8 ; DPF2 ; MIR612 ; MALAT1 ; NEAT1 ; TIGD3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_094100098 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers