SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_094100082
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: T98G
Genomic region: chr21:41751079-41769496
Size: 18417
Super-enhancer rank 82
Number of SE elements: 5
ChIP density(Case|Control): 23247.7791|2554.4379
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RIPK4 ;
ROSE Overlap RIPK4 ;
ROSE Proximal MIR6814 ; LINC00479 ; LINC00112 ;
ROSE Closest RIPK4 ;
Lasso ZBTB21 ; C2CD2 ; RIPK4 ;
PreSTIGE ;
ABC ;
BETA MIR6814 ; RIPK4 ; LINC00112 ; LINC00111 ; LINC00479 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_094100082 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers