SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_094100005
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Brain
Biosample name: T98G
Genomic region: chr5:139635987-139672231
Size: 36244
Super-enhancer rank 5
Number of SE elements: 10
ChIP density(Case|Control): 45428.2296|4436.2656
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CXXC5 ;
ROSE Overlap CXXC5 ;
ROSE Proximal ;
ROSE Closest CXXC5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CXXC5 ; UBE2D2 ; LOC101929696 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_094100005 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers