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Super-enhancer overview

SE ID: SE_02_093800640
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Retinal Pigmented Epithelial
Biosample name: RPE190_TnT
Genomic region: chr19:18279361-18305753
Size: 26392
Super-enhancer rank 640
Number of SE elements: 6
ChIP density(Case|Control): 29091.9016|3713.3544
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR3188;
ROSE Overlap MIR3188; JUND;
ROSE Proximal PDE4C; LSM4; JUND; PGPEP1; LOC729966; KIAA1683;
ROSE Closest MIR3188;
Lasso PDE4C; KIAA1683; PGPEP1; RAB3A; GDF15; PIK3R2; JUND; FKBP8; LSM4; SSBP4;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_093800640 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers