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Super-enhancer overview

SE ID: SE_02_093800122
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Retinal Pigmented Epithelial
Biosample name: RPE190_TnT
Genomic region: chr11:65416628-65455207
Size: 38579
Super-enhancer rank 122
Number of SE elements: 11
ChIP density(Case|Control): 64423.0721|5493.6496
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR612;
ROSE Overlap NEAT1; MIR612;
ROSE Proximal MALAT1; SLC25A45; FRMD8;
ROSE Closest MIR612;
Lasso SLC25A45; EHBP1L1; LTBP3; MAP3K11; POLA2; DPF2; SSSCA1; CDC42EP2; SCYL1; FRMD8; FAM89B;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_093800122 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers