SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_093700003
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Retinal Pigmented Epithelial
Biosample name: RPE190_Con
Genomic region: chr4:41359762-41542944
Size: 183182
Super-enhancer rank 3
Number of SE elements: 67
ChIP density(Case|Control): 292303.5174|37424.0826
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LIMCH1;
ROSE Overlap LIMCH1;
ROSE Proximal LIMCH1;
ROSE Closest LIMCH1;
Lasso LIMCH1;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_093700003 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers