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Super-enhancer overview

SE ID: SE_02_093600260
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Retinal Pigmented Epithelial
Biosample name: RPE188_TnT
Genomic region: chr5:141507595-141534580
Size: 26985
Super-enhancer rank 260
Number of SE elements: 10
ChIP density(Case|Control): 50443.0605|2085.9405
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PCDHGC5;
ROSE Overlap PCDHGB5; PCDHGB1; PCDHGC4; PCDHGA1; PCDHGA6; PCDHGB2; PCDHGA2; PCDHGA4; PCDHGB3; PCDHGC3; PCDHGA3; PCDHGA11; PCDHGA8; PCDHGA10; PCDHGA12; PCDHGA9; PCDHGB6; PCDHGA7; PCDHGC5; PCDHGB7; DIAPH1; PCDHGA5; PCDHGB4;
ROSE Proximal PCDHGC5; PCDHGC3; LOC100505658; PCDHGC4;
ROSE Closest PCDHGC5;
Lasso PCDHGC3; PCDHGA10; PCDHGB3; PCDHGC4; PCDHGC5; ARAP3; FCHSD1;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_093600260 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers