SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_093500548
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Retinal Pigmented Epithelial
Biosample name: RPE188_Con
Genomic region: chr3:63937817-63977187
Size: 39370
Super-enhancer rank 548
Number of SE elements: 12
ChIP density(Case|Control): 30956.631|5681.091
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATXN7;
ROSE Overlap ATXN7;
ROSE Proximal PSMD6; PSMD6-AS2;
ROSE Closest ATXN7;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_093500548 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers